Roger Pettett

Principal Systems Architect at Oxford Nanopore Technologies

United Kingdom

Current
Past
Education
  • University of Nottingham
  • The Perse School, Cambridge
Connections
162 connections
Industry
Computer Software
Websites

Roger Pettett’s Summary

Currently producing web-based systems to support next-next-generation sequencing.

Interests are in distributed, scalable architectures for massively parallel sequence data handling. Analysis pipelines, workflows, LIMS, leveraging cloud & grid technology.

Scalable web systems; Service-oriented architecture (SOA);
Rapid application development with Perl, Apache, Linux;
Spearheading agile software lifecycle & tools.

Roger Pettett’s Specialties:

"Next-gen" sequencing data management / information strategy
Scalable software/data services
Agile Perl application design & development,
Apache installation & configuration,
MySQL RDB design & configuration,
Linux - Slackware, Debian, Ubuntu
X/HTML, CSS, Javascript, jQuery


Roger Pettett’s Experience

  • Principal Systems Architect

    Oxford Nanopore Technologies

    (Nanotechnology industry)

    February 2009Present (11 months)

  • Consultant

    DECIPHER Consortium

    (Privately Held; 51-200 employees; Hospital & Health Care industry)

    September 2007Present (2 years 4 months)

    Performance and security optimisation involving systems & services architecture and application & database refactoring.

  • Owner

    PsyPhi Network Web Solutions

    (Information Technology and Services industry)

    January 2000Present (10 years )

  • Team Leader, New Pipeline Development

    Wellcome Trust Sanger Institute

    (Non-Profit; Research industry)

    May 2007February 2009 (1 year 10 months)

    Managing a small development team to design, implement and maintain pipeline systems for running 30 high-throughput, next generation sequencers producing 40TB+ data per week. Rapid implementation in Perl, MySQL, Template Toolkit and Prototype.js using agile methods.

  • Project Leader, Web Systems

    The Wellcome Trust Sanger Institute

    (Non-Profit; 501-1000 employees; Research industry)

    2003May 2007 (4 years )

    Responsible for building scalable web systems handling traffic from 100k hits/week in 1999 to 15m hits/week in 2007.

    Instituted site-wide software quality control measures for all centrally deployed web applications.

  • Senior Web Developer

    The Wellcome Trust Sanger Institute

    (Non-Profit; 501-1000 employees; Research industry)

    20022003 (1 year )

    Responsible for architecture, design, rapid development and coordination of a very wide variety of web-based software applications, primarily written in Perl.

  • Webmaster

    The Wellcome Trust Sanger Institute

    (Non-Profit; 201-500 employees; Biotechnology industry)

    19992002 (3 years )

  • Software Developer

    Chadwyck-Healey Ltd

    (Public Company; 51-200 employees; Online Media industry)

    19981999 (1 year )

    Software developer for electronic literature delivery systems built with C++, OpenText SGML and Netscape Commerce and Enterprise servers.

  • Junior Systems Administrator

    Addenbrookes NHS Trust

    (Non-Profit; 1001-5000 employees; Hospital & Health Care industry)

    19961997 (1 year )

    Two consecutive summer jobs. Member of the IT support team responsible for data recovery, networking and PC hardware support. Sole responsibility for augmenting the site's X400 email system with a sendmail SMTP server on Slackware Linux.


Roger Pettett’s Education

  • University of Nottingham

    BSc (Hons) , Computer Science , 19951998

  • The Perse School, Cambridge


Additional Information

Roger Pettett’s Websites:

Roger Pettett’s Groups:

  •    Ubuntu Users ( 10.000+ members ) Official Group
  •    University of Nottingham Alumni
  •    Malta Network
  •    Perl Mongers
  •    Agilistas
  •    Computational Biology
  •    Biotech & Pharma Professionals Network
  •    Bioinformatics geeks
  •    Scicasts B-to-B Science & Technology Network
  •    Life Science Professionals
  •    Medical Device Professionals Network
  •    NGS (Next Generation Sequencing)
  •    Augmented Reality Development Camp

Roger Pettett’s Contact Settings

Interested In:

  • career opportunities
  • consulting offers
  • new ventures
  • job inquiries
  • expertise requests
  • reference requests
  • getting back in touch

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