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Columbia University in the City of New York

Columbia University in the City of New York

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Genome Data Analytics Team Lead

– Present (1 year 4 months)

Systems Improvement Lead, Computational Biology Platform

(1 year 10 months)Greater St. Louis Area

Gene Regulation Lead, Gene Expression Technology

(1 year)Middleton, WI

Computational Biologist, Gene Expression Technology

(1 year 4 months)

Genetics Fellow & Postdoctoral Research Associate

Washington University School of Medicine
(2 years 1 month)

PhD Student & Graduate Research Assistant

Columbia University
(5 years 9 months)

Honors & Awards

Most Valuable Team Member

Monsanto Genome Analytics

Technology Leadership Mentoring Program


Competitive program for leadership development, including career mentoring with senior managers.

Post Doctoral Fellow in Informatics

PhRMA Foundation, Washington, DC

Genetics Fellow

Department of Genetics, Washington University School of Medicine, St. Louis, MO

Newberry Graduate Fellow

Department of Biological Sciences, Columbia University, New York, NY

Sajovic Graduate Fellow

Columbia University, New York, NY

Sajovic Graduate Fellow

Columbia University, New York, NY

Honorable Mention, Predoctoral Fellowship in Biological Sciences

Howard Hughes Medical Institute

Honorable Mention, Graduate Research Fellowship

National Science Foundation

Outstanding Senior Award

College of Agricultural and Life Sciences, University of Wisconsin, Madison

Hilldale Undergraduate Research Fellow

University of Wisconsin, Madison



Predictive modeling of genome-wide mRNA expression: from modules to molecules(Link)

Annu Rev Biophys Biomol Struct.
June 2007

Profiling condition-specific, genome-wide regulation of mRNA stability in yeast(Link)

Proc Natl Acad Sci U S A.
December 2005
  • Barrett Foat,
  • S. Sean Houshmandi,
  • Wendy M. Olivas,
  • Harmen J. Bussemaker

T-profiler: scoring the activity of predefined groups of genes using gene expression data(Link)

Nucleic Acids Res.
July 2005
  • Barrett Foat,
  • AndrĂ© Boorsma,
  • Daniel Vis,
  • Frans Klis,
  • Harmen J. Bussemaker

Identification of genes expressed in C. elegans touch receptor neurons(Link)

July 2002
  • Barrett Foat,
  • Yun Zhang,
  • Charles Ma,
  • Thomas Delohery,
  • Brian Nasipak,
  • Alexander Bounoutas,
  • Harmen J. Bussemaker,
  • Stuart K. Kim,
  • Martin Chalfie

Sister chromatids fail to separate during an induced endoreplication cycle in Drosophila embryos(Link)

Curr Bio.
May 2002
  • Barrett Foat,
  • Smruti J Vidwans,
  • Paul J DiGregorio,
  • Antony W Shermoen,
  • Janet Iwasa,
  • Nikita Yakubovich,
  • Patrick H O'Farrell


St. Louis R User Group

– Present


  • Bioinformatics
  • Computational Biology
  • Genomics
  • Molecular Biology
  • Genetics
  • Functional Genomics
  • Systems Biology
  • Statistics
  • R
  • Sequence Analysis
  • Gene Regulation
  • Data Analysis
  • Perl
  • Scientific Computing
  • High Performance...
  • Linux
  • Matrix Management
  • Transcriptomics
  • Predictive Modeling
  • C
  • Synthetic Biology
  • Parallel Computing
  • Clojure
  • Data Integration
  • Computational Genomics
  • Epigenetics
  • Epigenomics
  • See 12+  See less

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